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Dcu_g17279 (HOS15)


Aliases : HOS15

Description : component *(HOS15) of HDA9-PWR deacetylation complex & original description: none


Gene families : OG0003691 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17279
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Adi_g055561 HOS15 component *(HOS15) of HDA9-PWR deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Ceric.35G003200.1 HOS15, Ceric.35G003200 component *(HOS15) of HDA9-PWR deacetylation complex &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021680.25 HOS15 WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre12.g527500 HOS15 WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01000179001 HOS15 WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Mp6g00250.1 HOS15 component HOS15 of HDA9-PWR deacetylation complex 0.02 OrthoFinder output from all 47 species
Pir_g40975 HOS15 component *(HOS15) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Sam_g39864 No alias component *(HOS15) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Solyc04g078320.4.1 HOS15, Solyc04g078320 component HOS15 of HDA9-PWR deacetylation complex 0.04 OrthoFinder output from all 47 species
Zm00001e008690_P001 HOS15, Zm00001e008690 component HOS15 of HDA9-PWR deacetylation complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006594 LisH 8 32
IPR001680 WD40_repeat 518 564
IPR001680 WD40_repeat 610 645
IPR001680 WD40_repeat 570 606
IPR001680 WD40_repeat 476 513
IPR001680 WD40_repeat 295 329
IPR001680 WD40_repeat 350 389
IPR001680 WD40_repeat 396 430
No external refs found!