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  5. Dcu_g16384

Dcu_g16384


Description : mTERF-type transcription factor & original description: none


Gene families : OG0002885 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g16384
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Adi_g109924 No alias mTERF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02391 No alias mTERF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16543 No alias mTERF-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g03515 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20285.t1 Aspi01Gene20285 mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0043.g027080 No alias mTERF-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000367.14 No alias RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021038.98 No alias RNA biosynthesis.organelle... 0.01 OrthoFinder output from all 47 species
Dde_g01666 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13746 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01313 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_10479 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_10432566g0010 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_10434956g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_125123g0020 No alias transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
Mp1g27070.1 EMB2219 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Nbi_g17201 No alias mTERF-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g06768 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09762 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15396 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 336 640
IPR003690 MTERF 235 345
IPR003690 MTERF 298 375
No external refs found!