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  5. Dcu_g16113

Dcu_g16113 (HSL1, VAL2, HSI2-L1)


Aliases : HSL1, VAL2, HSI2-L1

Description : LAV-VAL-type transcription factor & original description: none


Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g16113
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Aob_g30085 HSI2, VAL1 LAV-VAL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_119006g0010 HSI2, VAL1 B3 domain-containing protein Os07g0679700 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Solyc06g082520.3.1 HSI2, VAL1,... transcription factor (LAV-VAL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 437 536
No external refs found!