- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : assembly factor CRR41 involved in NDH complex assembly & original description: none
Gene families : OG0008879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008879_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g15291 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00115p00066030 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.chlororespiration.NAD... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g02175 | No alias | assembly factor CRR41 involved in NDH complex assembly &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23794 | No alias | assembly factor CRR41 involved in NDH complex assembly &... | 0.09 | OrthoFinder output from all 47 species | |
| Aspi01Gene27193.t1 | Aspi01Gene27193 | assembly factor CRR41 involved in NDH complex assembly &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g14753 | No alias | assembly factor CRR41 involved in NDH complex assembly &... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g00432 | No alias | assembly factor CRR41 involved in NDH complex assembly &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014606001 | No alias | Photosynthesis.photophosphorylation.chlororespiration.NAD... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_15735 | No alias | assembly factor CRR41 involved in NDH complex assembly | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g13510.1 | No alias | assembly factor CRR41 involved in NDH complex assembly | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g06327 | No alias | assembly factor CRR41 involved in NDH complex assembly &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g064100.1.1 | Solyc07g064100 | assembly factor CRR41 involved in NDH complex assembly | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05135 | No alias | assembly factor CRR41 involved in NDH complex assembly &... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |