- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : WCRKC2
Description : plastidial thioredoxin *(TrxL2) & original description: none
Gene families : OG0003501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003501_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g13155 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g074477 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g00669 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Als_g02891 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Als_g17986 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g09350 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g19295 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene09674.t1 | WCRKC1, Aspi01Gene09674 | plastidial thioredoxin *(TrxL2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g78057 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.14G067600.1 | WCRKC2, Ceric.14G067600 | plastidial thioredoxin *(TrxL2) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g16962 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g12646 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g19036 | WCRKC1 | plastidial thioredoxin *(TrxL2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05250 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016235001 | WCRKC2 | Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Len_g00345 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05918 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Mp5g20740.1 | WCRKC2 | Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g07535 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11291 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g19467 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g31755 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0175.g024567 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g03171 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g27254 | WCRKC2 | plastidial thioredoxin *(TrxL2) & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004096 | catalase activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0004359 | glutaminase activity | IEP | HCCA |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0042816 | vitamin B6 metabolic process | IEP | HCCA |
| BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | HCCA |
| BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | HCCA |
| BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046184 | aldehyde biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013766 | Thioredoxin_domain | 73 | 161 |
| No external refs found! |