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  5. Dcu_g12721

Dcu_g12721


Description : not classified & original description: none


Gene families : OG0006180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12721
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Adi_g055406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G043100.1 Ceric.04G043100 not classified & original description: pacid=50630795... 0.03 OrthoFinder output from all 47 species
Dac_g07701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033643001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g16099 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp2g24400.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g08026 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g44320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g020000.3.1 Solyc12g020000 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!