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  5. Dcu_g12709

Dcu_g12709 (G2484-1, ATG2484-1)


Aliases : G2484-1, ATG2484-1

Description : not classified & original description: none


Gene families : OG0002573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12709
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00148070 G2484-1,... No description available 0.08 OrthoFinder output from all 47 species
AT4G17330 G2484-1, ATG2484-1 G2484-1 protein 0.16 OrthoFinder output from all 47 species
Adi_g077944 G2484-1, ATG2484-1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g087228 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07336 G2484-1, ATG2484-1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g27665 G2484-1, ATG2484-1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g12999 G2484-1, ATG2484-1 not classified & original description: none 0.16 OrthoFinder output from all 47 species
Als_g23052 G2484-1, ATG2484-1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g64007 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12306 G2484-1, ATG2484-1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g09060 G2484-1, ATG2484-1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene43305.t2 G2484-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044091 G2484-1, ATG2484-1 not classified & original description: CDS=19-6000 0.11 OrthoFinder output from all 47 species
Cba_g22302 G2484-1, ATG2484-1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.36G054700.1 Ceric.36G054700 not classified & original description: pacid=50568782... 0.14 OrthoFinder output from all 47 species
Dac_g20555 G2484-1, ATG2484-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04956 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10041 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01004716001 G2484-1, ATG2484-1 No description available 0.12 OrthoFinder output from all 47 species
Gb_04223 G2484-1, ATG2484-1 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Gb_15039 G2484-1, ATG2484-1 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
LOC_Os10g41030.1 G2484-1,... no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g14749 G2484-1, ATG2484-1 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Lfl_g03523 G2484-1, ATG2484-1 not classified & original description: none 0.15 OrthoFinder output from all 47 species
MA_20337g0010 G2484-1, ATG2484-1 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g39520 G2484-1, ATG2484-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09007 G2484-1, ATG2484-1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g12170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25098 G2484-1, ATG2484-1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g39400 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g09835 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16311 G2484-1, ATG2484-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014511 G2484-1, ATG2484-1 not classified & original description: CDS=645-7112 0.07 OrthoFinder output from all 47 species
Sam_g18066 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Smo415212 G2484-1, ATG2484-1 No description available 0.06 OrthoFinder output from all 47 species
Solyc08g078530.4.1 G2484-1,... no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Spa_g29421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33264 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g49740 G2484-1, ATG2484-1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g08474 G2484-1, ATG2484-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002323_P004 G2484-1,... no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Zm00001e037875_P005 G2484-1,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 2399 2464
No external refs found!