Dcu_g12677

Description : component *(uL14) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001634_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g12677
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00206470	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
AT1G04480	No alias	Ribosomal protein L14p/L23e family protein	0.07	OrthoFinder output from all 47 species
AT2G33370	No alias	Ribosomal protein L14p/L23e family protein	0.06	OrthoFinder output from all 47 species
AT3G04400	emb2171	Ribosomal protein L14p/L23e family protein	0.08	OrthoFinder output from all 47 species
Ala_g00489	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ala_g22432	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g57360	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Aob_g05420	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g04807	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g08703	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g30194	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0018.g014977	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0509.g074710	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021290.9	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre04.g211800	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Dac_g34723	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01027905001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	OrthoFinder output from all 47 species
GSVIVT01028407001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	OrthoFinder output from all 47 species
Gb_21541	No alias	component RPL23 of LSU proteome component	0.06	OrthoFinder output from all 47 species
LOC_Os02g56960.1	LOC_Os02g56960	component RPL23 of LSU proteome component	0.05	OrthoFinder output from all 47 species
LOC_Os03g04590.1	LOC_Os03g04590	component RPL23 of LSU proteome component	0.06	OrthoFinder output from all 47 species
LOC_Os10g32920.1	LOC_Os10g32920	component RPL23 of LSU proteome component	0.08	OrthoFinder output from all 47 species
Len_g18420	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Lfl_g28330	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
MA_10432200g0010	No alias	component RPL23 of LSU proteome component	0.06	OrthoFinder output from all 47 species
MA_950121g0010	No alias	component RPL23 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Mp6g14310.1	No alias	component RPL23 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Nbi_g20041	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ore_g17887	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c27_860V3.1	Pp3c27_860	Ribosomal protein L14p/L23e family protein	0.04	OrthoFinder output from all 47 species
Smo165708	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Solyc06g008170.3.1	Solyc06g008170	component RPL23 of LSU proteome component	0.1	OrthoFinder output from all 47 species
Solyc06g083780.3.1	Solyc06g083780	component RPL23 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Solyc09g072865.1.1	Solyc09g072865	component RPL23 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Solyc09g090610.3.1	Solyc09g090610	component RPL23 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Spa_g17111	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g21229	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g52019	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g03689	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Tin_g26632	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Zm00001e000323_P001	Zm00001e000323	component RPL23 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Zm00001e012721_P001	Zm00001e012721	component RPL23 of LSU proteome component	0.11	OrthoFinder output from all 47 species
Zm00001e038953_P001	Zm00001e038953	component RPL23 of LSU proteome component	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003714	transcription corepressor activity	IEP	HCCA
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
CC	GO:0008250	oligosaccharyltransferase complex	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
CC	GO:0034998	oligosaccharyltransferase I complex	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000218	Ribosomal_L14P	37	155

External Links

No external refs found!

Dcu_g12677

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation