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Description : not classified & original description: none
Gene families : OG0004428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004428_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g11589 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00264760 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT2G34357 | No alias | ARM repeat superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g021099 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g05537 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07501 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011517 | No alias | not classified & original description: CDS=97-4008 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G047800.1 | Ceric.18G047800 | not classified & original description: pacid=50622555... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020554.42 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Cre19.g751197 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01023097001 | No alias | No description available | 0.08 | OrthoFinder output from all 47 species | |
| Gb_23183 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g54110.1 | LOC_Os02g54110 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g20663 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07438 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_55053g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g25050.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36824 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Smo78845 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Solyc07g042380.4.1 | Solyc07g042380 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29647 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016059_P003 | Zm00001e016059 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012978 | RRP12-like_dom | 401 | 603 |
| No external refs found! |