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  5. Dcu_g09890

Dcu_g09890 (MEE32, EMB3004)


Aliases : MEE32, EMB3004

Description : 3-dehydroquinate dehydratase and shikimate dehydrogenase & original description: none


Gene families : OG0001444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09890

Target Alias Description ECC score Gene Family Method Actions
Aop_g14586 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Dac_g12106 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.05 OrthoFinder output from all 47 species
Zm00001e017662_P001 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041121 SDH_C 485 513
IPR013708 Shikimate_DH-bd_N 245 325
IPR001381 DHquinase_I 9 231
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 365 432
No external refs found!