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  5. Dcu_g09640

Dcu_g09640 (FAS4, ATFAS4)


Aliases : FAS4, ATFAS4

Description : not classified & original description: none


Gene families : OG0005211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09640

Target Alias Description ECC score Gene Family Method Actions
Ceric.09G059400.1 FAS4, ATFAS4,... not classified & original description: pacid=50588370... 0.04 OrthoFinder output from all 47 species
GSVIVT01028054001 FAS4, ATFAS4 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Mp4g04560.1 FAS4, ATFAS4 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Sam_g29722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 57 233
IPR007502 Helicase-assoc_dom 612 703
IPR011709 DEAD-box_helicase_OB_fold 837 930
IPR001650 Helicase_C 462 550
No external refs found!