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  5. Dcu_g08853

Dcu_g08853


Description : subunit delta of cargo adaptor F-subcomplex & original description: none


Gene families : OG0002181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08853

Target Alias Description ECC score Gene Family Method Actions
AT5G05010 No alias clathrin adaptor complexes medium subunit family protein 0.05 OrthoFinder output from all 47 species
Adi_g023116 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Adi_g054760 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Adi_g088072 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Adi_g103954 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ala_g38100 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Als_g27387 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Als_g32029 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Aop_g08892 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Cba_g77901 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ceric.32G009500.1 Ceric.32G009500 subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Cre02.g089100 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Dac_g03342 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g01445 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01012108001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
Gb_08194 No alias subunit delta of cargo adaptor F-subcomplex 0.08 OrthoFinder output from all 47 species
LOC_Os05g24601.1 LOC_Os05g24601 subunit delta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Len_g21873 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Lfl_g01632 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.1 OrthoFinder output from all 47 species
MA_20701g0020 No alias Coatomer subunit delta-2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_7657529g0010 No alias subunit delta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Mp3g04840.1 No alias subunit delta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Msp_g01169 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Nbi_g09025 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Nbi_g11812 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Pir_g02815 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Ppi_g05201 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014418 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Sam_g18687 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Smo172790 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc01g103480.3.1 Solyc01g103480 subunit delta of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
Spa_g05208 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Spa_g26901 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Tin_g08212 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e018368_P003 Zm00001e018368 subunit delta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Zm00001e039766_P001 Zm00001e039766 subunit delta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004615 phosphomannomutase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR028565 MHD 277 496
No external refs found!