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  5. Dcu_g08691

Dcu_g08691


Description : cutin and suberin biosynthesis transcription factor *(SHN) & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08691
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Adi_g010029 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03105 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Als_g36635 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aob_g01979 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aob_g03996 HRD subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g23166 No alias cutin and suberin biosynthesis transcription factor... 0.04 OrthoFinder output from all 47 species
Aob_g32316 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Cba_g78270 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ehy_g11203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29593 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011465001 RAP2.11 External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
GSVIVT01021060001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01022076001 DEAR3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
LOC_Os01g64790.1 ERF110, LOC_Os01g64790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g15660.1 DREB26, LOC_Os03g15660 Ethylene-responsive transcription factor ERF012... 0.04 OrthoFinder output from all 47 species
MA_103035g0010 No alias transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_18403g0020 No alias Ethylene-responsive transcription factor RAP2-4... 0.02 OrthoFinder output from all 47 species
MA_2446g0010 No alias Ethylene-responsive transcription factor ERF053... 0.03 OrthoFinder output from all 47 species
MA_5658g0010 ATERF12, ERF12 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_9260020g0010 SHN3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g20040.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Mp2g11080.1 HRE2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Mp7g09350.1 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Pnu_g12819 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016160 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g34704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21487 RAP2.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 55
No external refs found!