Dcu_g08189

Description : not classified & original description: none

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g08189
Cluster	HCCA: Cluster_210

Target	Alias	Description	ECC score	Gene Family Method
AT3G28520	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
Azfi_s0059.g034525	No alias	not classified & original description: CDS=1-2166	0.03	OrthoFinder output from all 47 species
Dcu_g05632	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g44256	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01029545001	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os07g09470.1	LOC_Os07g09470	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os09g27340.1	LOC_Os09g27340	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g44190.1	AATP1, LOC_Os12g44190	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10111030g0010	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Nbi_g11172	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002692	No alias	not classified & original description: CDS=1-1494	0.03	OrthoFinder output from all 47 species
Solyc12g055810.1.1	Solyc12g055810	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Spa_g49606	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	26	117
IPR003959	ATPase_AAA_core	240	373

External Links

No external refs found!

Dcu_g08189

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation