1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g08135

Dcu_g08135 (RPS1, ARRPS1)


Aliases : RPS1, ARRPS1

Description : component *(bS1c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002574_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08135
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00212290 RPS1, ARRPS1,... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
AT5G30510 RPS1, ARRPS1 ribosomal protein S1 0.08 OrthoFinder output from all 47 species
Adi_g033757 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aev_g03971 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ala_g01963 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Als_g07823 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Als_g32395 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Aob_g17787 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Aop_g12017 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Aop_g41967 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aspi01Gene13361.t1 RPS1, ARRPS1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene46819.t1 RPS1, ARRPS1,... component *(bS1c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Cba_g03811 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cba_g16776 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cba_g16777 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ceric.32G044800.1 RPS1, ARRPS1,... component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cre09.g394750 RPS1, ARRPS1 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Dac_g12960 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dde_g07822 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ehy_g01340 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01034940001 RPS1, ARRPS1 Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Gb_02217 RPS1, ARRPS1 component psRPS1 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
LOC_Os03g20100.1 RPS1, ARRPS1,... component psRPS1 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g02246 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Len_g04250 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g03066 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
MA_694512g0010 RPS1, ARRPS1 30S ribosomal protein S1, chloroplastic OS=Spinacia... 0.05 OrthoFinder output from all 47 species
Msp_g22203 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Nbi_g09544 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Ore_g07549 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Pir_g10266 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pnu_g11886 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ppi_g05695 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Sam_g07761 No alias component *(bS1c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sam_g09837 No alias component *(bS1c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Smo271018 RPS1, ARRPS1 Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
Solyc01g057830.3.1 RPS1, ARRPS1,... component psRPS1 of small ribosomal subunit proteome 0.09 OrthoFinder output from all 47 species
Spa_g01530 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Spa_g07743 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g04575 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Zm00001e038288_P002 RPS1, ARRPS1,... component psRPS1 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 264 333
IPR003029 S1_domain 186 250
IPR003029 S1_domain 99 170
No external refs found!