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  5. Dcu_g07776

Dcu_g07776


Description : subunit alpha of coat protein complex & original description: none


Gene families : OG0001943 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001943_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g07776

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00220200 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
AT1G62020 No alias Coatomer, alpha subunit 0.03 OrthoFinder output from all 47 species
AT2G21390 No alias Coatomer, alpha subunit 0.06 OrthoFinder output from all 47 species
Adi_g019461 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Adi_g055850 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g117171 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Aev_g07325 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Aev_g07330 No alias subunit alpha of coat protein complex & original... 0.06 OrthoFinder output from all 47 species
Aop_g37693 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0157.g053779 No alias subunit alpha of coat protein complex & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0246.g060019 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G051100.1 Ceric.26G051100 subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.27G001800.1 Ceric.27G001800 subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.37G062500.1 Ceric.37G062500 subunit alpha of coat protein complex & original... 0.05 OrthoFinder output from all 47 species
Cre13.g565850 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
GSVIVT01009813001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_09624 No alias subunit alpha of coat protein complex 0.05 OrthoFinder output from all 47 species
Gb_15817 No alias subunit alpha of coat protein complex 0.08 OrthoFinder output from all 47 species
LOC_Os03g50340.1 LOC_Os03g50340 subunit alpha of coat protein complex 0.05 OrthoFinder output from all 47 species
LOC_Os03g50350.1 LOC_Os03g50350 subunit alpha of coat protein complex 0.04 OrthoFinder output from all 47 species
LOC_Os09g04110.1 LOC_Os09g04110 subunit alpha of coat protein complex 0.06 OrthoFinder output from all 47 species
Lfl_g09317 No alias subunit alpha of coat protein complex & original... 0.07 OrthoFinder output from all 47 species
MA_10428405g0010 No alias subunit alpha of coat protein complex 0.03 OrthoFinder output from all 47 species
MA_10429054g0020 No alias subunit alpha of coat protein complex 0.03 OrthoFinder output from all 47 species
MA_10429054g0030 No alias Coatomer subunit alpha-1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp3g00050.1 No alias subunit alpha of coat protein complex 0.04 OrthoFinder output from all 47 species
Nbi_g06320 No alias subunit alpha of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Ore_g15161 No alias subunit alpha of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Smo85610 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 OrthoFinder output from all 47 species
Solyc04g080980.2.1 Solyc04g080980 subunit alpha of coat protein complex 0.05 OrthoFinder output from all 47 species
Solyc07g032100.3.1 Solyc07g032100 subunit alpha of coat protein complex 0.08 OrthoFinder output from all 47 species
Zm00001e005441_P001 Zm00001e005441 subunit alpha of coat protein complex 0.03 OrthoFinder output from all 47 species
Zm00001e012192_P001 Zm00001e012192 subunit alpha of coat protein complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR010714 Coatomer_asu_C 814 1214
IPR006692 Coatomer_WD-assoc_reg 340 769
IPR001680 WD40_repeat 241 276
IPR001680 WD40_repeat 84 121
IPR001680 WD40_repeat 126 163
IPR001680 WD40_repeat 45 79
IPR001680 WD40_repeat 198 231
No external refs found!