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  5. Dcu_g07773

Dcu_g07773


Description : transcriptional co-regulator *(Oberon) & original description: none


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g07773

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00014560 evm_27.TU.AmTr_v1... Protein OBERON 3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT3G07780 OBE1 Protein of unknown function (DUF1423) 0.03 OrthoFinder output from all 47 species
AT5G48160 OBE2 Protein of unknown function (DUF1423) 0.03 OrthoFinder output from all 47 species
Adi_g007175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077978 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Adi_g098683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g122453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07409 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ala_g12542 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0063.g035336 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Ceric.22G032700.1 Ceric.22G032700 transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g02961 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g34699 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Msp_g14069 No alias transcriptional co-regulator *(Oberon) & original... 0.07 OrthoFinder output from all 47 species
Msp_g40697 OBE1 transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g29630 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g24330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03975 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003758 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015578 OBE2 transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Smo70453 OBE2 Protein OBERON 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g087490.4.1 Solyc01g087490 Protein OBERON 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g018500.3.1 Solyc05g018500 Protein OBERON 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g047780.3.1 OBE2, Solyc07g047780 OBERON-like protein OS=Nicotiana benthamiana... 0.02 OrthoFinder output from all 47 species
Zm00001e000995_P002 Zm00001e000995 no description available(sp|q10pc5|tta1_orysj : 940.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 1035 1156
IPR032535 Oberon_cc 1260 1387
No external refs found!