1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g06473

Dcu_g06473


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06473
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Adi_g004298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37757 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06815 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24197 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28645 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37347 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40270 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001369 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: CDS=172-2610 0.03 OrthoFinder output from all 47 species
Azfi_s0082.g038688 No alias not classified & original description: CDS=1-3078 0.04 OrthoFinder output from all 47 species
Azfi_s0485.g073410 No alias not classified & original description: CDS=1-1641 0.03 OrthoFinder output from all 47 species
Cba_g06947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07270 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07735 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17429 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18747 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05782 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06788 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07656 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07741 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08305 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17044 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26819 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50033 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032994001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_38938 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24680.1 LOC_Os09g24680 Pentatricopeptide repeat-containing protein At1g74600,... 0.02 OrthoFinder output from all 47 species
Len_g18970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07844 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14691 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17690 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43122 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000718 No alias not classified & original description: CDS=152-1756 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016469 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2448 0.03 OrthoFinder output from all 47 species
Sam_g12066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23794 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003876 AMP deaminase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032261 purine nucleotide salvage IEP HCCA
BP GO:0032264 IMP salvage IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0047623 adenosine-phosphate deaminase activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0106380 purine ribonucleotide salvage IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 593 614
IPR002885 Pentatricopeptide_repeat 291 314
IPR046848 E_motif 636 698
IPR046849 Eplus_motif 704 725
IPR002885 Pentatricopeptide_repeat 114 161
IPR002885 Pentatricopeptide_repeat 519 566
IPR002885 Pentatricopeptide_repeat 215 263
IPR002885 Pentatricopeptide_repeat 417 464
IPR002885 Pentatricopeptide_repeat 317 364
No external refs found!