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  5. Dcu_g06411

Dcu_g06411 (ftsh4)


Aliases : ftsh4

Description : ATP-dependent metalloprotease *(FtsH4/11) & original description: none


Gene families : OG0001340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06411

Target Alias Description ECC score Gene Family Method Actions
Ala_g28204 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Als_g52491 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Ceric.25G029600.1 ftsh4, Ceric.25G029600 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01035393001 ftsh4 Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
Lfl_g10762 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.02 OrthoFinder output from all 47 species
Ore_g40941 FTSH11 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.04 OrthoFinder output from all 47 species
Ore_g40942 FTSH11 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g11457 FTSH11 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Sam_g29548 No alias ATP-dependent metalloprotease *(FtsH4/11) & original... 0.02 OrthoFinder output from all 47 species
Solyc11g069950.2.1 ftsh4, Solyc11g069950 component FtsH4|11 of FtsH mitochondrial protease complexes 0.04 OrthoFinder output from all 47 species
Tin_g11112 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEA Interproscan
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 274 403
IPR041569 AAA_lid_3 426 469
IPR000642 Peptidase_M41 485 665
No external refs found!