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  5. Dcu_g04842

Dcu_g04842 (CYP71)


Aliases : CYP71

Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0005569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04842
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00179700 CYP71,... Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
AT3G44600 CYP71 cyclophilin71 0.02 OrthoFinder output from all 47 species
Cre10.g453900 CYP71 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
GSVIVT01031368001 CYP71 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
LOC_Os08g44330.1 CYP71, LOC_Os08g44330 protein folding catalyst 0.06 OrthoFinder output from all 47 species
Lfl_g04089 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435216g0010 CYP71 protein folding catalyst 0.04 OrthoFinder output from all 47 species
Mp8g10140.1 CYP71 protein folding catalyst 0.04 OrthoFinder output from all 47 species
Ore_g38390 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01011 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52370 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g067090.2.1 CYP71, Solyc11g067090 protein folding catalyst 0.05 OrthoFinder output from all 47 species
Spa_g18828 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11249 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e022082_P005 CYP71, Zm00001e022082 protein folding catalyst 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 463 613
IPR001680 WD40_repeat 90 126
No external refs found!