Dcu_g04326 (emb1624)

Aliases : emb1624

Description : ribosome assembly factor *(eIF6)) & original description: none

Gene families : OG0003617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003617_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g04326

Target	Alias	Description	ECC score	Gene Family Method
Adi_g017045	emb1624	ribosome assembly factor *(eIF6)) & original description: none	0.02	OrthoFinder output from all 47 species
Cre13.g585150	emb1624	Protein biosynthesis.translation initiation.eIF6...	0.01	OrthoFinder output from all 47 species
Ppi_g25132	emb1624	ribosome assembly factor *(eIF6)) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0042255	ribosome assembly	None	Extended
BP	GO:0042256	cytosolic ribosome assembly	IEA	Interproscan
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
MF	GO:0043022	ribosome binding	IEA	Interproscan
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0140694	non-membrane-bounded organelle assembly	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071569	protein ufmylation	IEP	HCCA
CC	GO:0097525	spliceosomal snRNP complex	IEP	HCCA
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	HCCA
CC	GO:0120114	Sm-like protein family complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002769	eIF6	4	203

External Links

No external refs found!