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  5. Dcu_g04088

Dcu_g04088


Description : not classified & original description: none


Gene families : OG0001166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04088

Target Alias Description ECC score Gene Family Method Actions
AT2G25460 No alias CONTAINS InterPro DOMAIN/s: C2 calcium-dependent... 0.05 OrthoFinder output from all 47 species
Ala_g11271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05090 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g05316 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene46910.t1 Aspi01Gene46910 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G036200.1 Ceric.38G036200 not classified & original description: pacid=50579469... 0.02 OrthoFinder output from all 47 species
Dde_g28805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035860001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os01g09770.1 LOC_Os01g09770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g13135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g009790.4.1 Solyc04g009790 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Solyc08g059710.4.1 Solyc08g059710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g17144 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g08991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e025940_P001 Zm00001e025940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 18 182
No external refs found!