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  5. Dcu_g03544

Dcu_g03544 (MSS3)


Aliases : MSS3

Description : not classified & original description: none


Gene families : OG0002586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03544

Target Alias Description ECC score Gene Family Method Actions
AT5G49480 CP1, ATCP1 Ca2+-binding protein 1 0.07 OrthoFinder output from all 47 species
Aev_g05732 TCH3, ATCAL4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32875 CP1, ATCP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g61644 CP1, ATCP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08743 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08553 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25877.t1 UNE14, Aspi01Gene25877 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53735.t1 UNE14, Aspi01Gene53735 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53735.t2 UNE14, Aspi01Gene53735 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53739.t2 UNE14, Aspi01Gene53739 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53740.t1 UNE14, Aspi01Gene53740 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53742.t1 UNE14, Aspi01Gene53742 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_05638 CP1, ATCP1 Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_05639 CP1, ATCP1 Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g19720.1 CP1, ATCP1,... Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g13581 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28001 CP1, ATCP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05179 UNE14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11155 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44730 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc01g058720.4.1 CP1, ATCP1,... Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g50847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004126 cytidine deaminase activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006213 pyrimidine nucleoside metabolic process IEP HCCA
BP GO:0006216 cytidine catabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009164 nucleoside catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009972 cytidine deamination IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP HCCA
BP GO:0042454 ribonucleoside catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046087 cytidine metabolic process IEP HCCA
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP HCCA
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP HCCA
BP GO:0046135 pyrimidine nucleoside catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 106 127
IPR002048 EF_hand_dom 26 87
No external refs found!