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Description : not classified & original description: none
Gene families : OG0004514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004514_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g01969 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00069p00204310 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g103922 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g29189 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g56841 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g10891 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g23803 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.29G083000.1 | Ceric.29G083000 | not classified & original description: pacid=50625581... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g37259 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027630001 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g03560.1 | LOC_Os03g03560 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02312 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Mp1g04060.1 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g16500 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38992 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g091500.3.1 | Solyc01g091500 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | IEP | HCCA |
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| BP | GO:0043484 | regulation of RNA splicing | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048024 | regulation of mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0050684 | regulation of mRNA processing | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000253 | FHA_dom | 90 | 175 |
| No external refs found! |