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  5. Dcu_g00479

Dcu_g00479


Description : not classified & original description: none


Gene families : OG0001941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g00479

Target Alias Description ECC score Gene Family Method Actions
Aev_g23944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g44215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023662 No alias not classified & original description: CDS=24-455 0.06 OrthoFinder output from all 47 species
Ceric.13G075900.1 Ceric.13G075900 not classified & original description: pacid=50635895... 0.03 OrthoFinder output from all 47 species
Dac_g27435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g20930.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g35258 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021811 No alias not classified & original description: CDS=1-261 0.03 OrthoFinder output from all 47 species
Sam_g47459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo438100 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo438219 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g29492 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 131 173
No external refs found!