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  5. Spa_g57345

Spa_g57345 (RBL1, ATRBL1)


Aliases : RBL1, ATRBL1

Description : protease *(RBL) & original description: none


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g57345
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00195850 KOM,... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
AMTR_s00104p00044730 RBL1, ATRBL1,... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.04 OrthoFinder output from all 47 species
AT2G29050 RBL1, ATRBL1 RHOMBOID-like 1 0.02 OrthoFinder output from all 47 species
AT3G53780 RBL4, ATRBL4 RHOMBOID-like protein 4 0.03 OrthoFinder output from all 47 species
Aev_g02072 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05510 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05092 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42772 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g43320.1 RBL2, ATRBL2,... protease (RBL) 0.05 OrthoFinder output from all 47 species
LOC_Os09g35730.1 RBL3, ATRBL3,... protease (RBL) 0.03 OrthoFinder output from all 47 species
Len_g13142 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g24417 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06970 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09832 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10257 RBL1, ATRBL1 protease *(RBL) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018958 RBL1, ATRBL1 protease *(RBL) & original description: CDS=1-1146 0.03 OrthoFinder output from all 47 species
Sam_g14383 No alias protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02797 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000111_P001 RBL2, ATRBL2,... protease (RBL) 0.04 OrthoFinder output from all 47 species
Zm00001e024265_P001 RBL2, ATRBL2,... protease (RBL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 114 255
No external refs found!