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  5. Aev_g24666

Aev_g24666


Description : cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7) & original description: none


Gene families : OG0006155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g24666

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00150890 PDE225, PTAC7,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
AT5G24314 PDE225, PTAC7 plastid transcriptionally active7 0.02 OrthoFinder output from all 47 species
Dcu_g13646 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.03 OrthoFinder output from all 47 species
LOC_Os01g50930.1 PDE225, PTAC7,... TAC7 cofactor of plastid-encoded RNA polymerase 0.04 OrthoFinder output from all 47 species
Pir_g00281 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.03 OrthoFinder output from all 47 species
Spa_g03374 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.04 OrthoFinder output from all 47 species
Spa_g03375 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.04 OrthoFinder output from all 47 species
Tin_g35005 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!