1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g56826

Spa_g56826


Description : UMF23-type solute transporter & original description: none


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56826
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Adi_g060196 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103391 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61139 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09437 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30040 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14224.t1 Aspi01Gene14224 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19931.t1 Aspi01Gene19931 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21553.t1 Aspi01Gene21553 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40218.t1 Aspi01Gene40218 UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51117.t1 Aspi01Gene51117 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51956.t1 Aspi01Gene51956 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G060500.1 Ceric.11G060500 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G046300.1 Ceric.33G046300 UMF23-type solute transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g16430 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28687 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04843 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10986 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016196001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01016200001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g47810.1 LOC_Os03g47810 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
LOC_Os12g44060.1 LOC_Os12g44060 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
LOC_Os12g44070.1 LOC_Os12g44070 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
MA_10099391g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_120504g0010 No alias anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
Msp_g32262 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29994 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013356 No alias UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Smo166510 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc11g008200.2.1 Solyc11g008200 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Spa_g10300 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003676_P002 Zm00001e003676 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 2 104
No external refs found!