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  5. Spa_g56301

Spa_g56301


Description : not classified & original description: none


Gene families : OG0001680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56301
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g50220.1 LOC_Os06g50220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_376347g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g26068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo98811 No alias No description available 0.02 OrthoFinder output from all 47 species
Zm00001e019113_P001 Zm00001e019113 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027001_P003 Zm00001e027001 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045927 positive regulation of growth IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR021864 DUF3475 132 188
IPR007700 DUF668 355 464
No external refs found!