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Description : component *(uL10) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0002053 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002053_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00231170 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
| AT3G09200 | No alias | Ribosomal protein L10 family protein | 0.17 | OrthoFinder output from all 47 species | |
| AT3G11250 | No alias | Ribosomal protein L10 family protein | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g013157 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g31921 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g01443 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g13520 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Aspi01Gene70147.t1 | Aspi01Gene70147 | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0024.g020356 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Cba_g05117 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G048600.1 | Ceric.18G048600 | component *(uL10) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000615.69 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | OrthoFinder output from all 47 species | |
| Cre12.g520500 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g01446 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g00958 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Dcu_g24985 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g15003 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016313001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01032857001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os08g03640.1 | LOC_Os08g03640 | component RPP0 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os12g03880.1 | LOC_Os12g03880 | component RPP0 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Len_g16154 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| MA_10433058g0020 | No alias | component RPP0 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
| Mp1g06170.1 | No alias | component RPP0 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g07120.1 | No alias | component RPP0 of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
| Msp_g27434 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05238 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g06033 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10636 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c11_3700V3.1 | Pp3c11_3700 | Ribosomal protein L10 family protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c1_8280V3.1 | Pp3c1_8280 | Ribosomal protein L10 family protein | 0.08 | OrthoFinder output from all 47 species | |
| Ppi_g21265 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22016 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0012.g005433 | No alias | component *(cpTatC) of thylakoid membrane Tat... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0023.g008845 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g06149 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06150 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g09753 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g09883 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Sam_g12721 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Smo149765 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Smo437282 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g054580.3.1 | Solyc05g054580 | component RPP0 of LSU proteome component | 0.18 | OrthoFinder output from all 47 species | |
| Tin_g14132 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e021786_P001 | Zm00001e021786 | component RPP0 of LSU proteome component | 0.2 | OrthoFinder output from all 47 species | |
| Zm00001e029292_P001 | Zm00001e029292 | component RPP0 of LSU proteome component | 0.17 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| CC | GO:0030684 | preribosome | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| CC | GO:0032040 | small-subunit processome | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |