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  5. Spa_g55008

Spa_g55008 (GAD2)


Aliases : GAD2

Description : glutamate decarboxylase *(GAD) & original description: none


Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g55008

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00145270 GAD, GAD1,... Amino acid metabolism.biosynthesis.glutamate... 0.02 OrthoFinder output from all 47 species
AT5G17330 GAD, GAD1 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Ala_g03790 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12693.t1 GAD, GAD1,... glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37978.t1 GAD, GAD1,... glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G021000.1 GAD, GAD1,... glutamate decarboxylase *(GAD) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g03311 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32572 GAD, GAD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000391001 GAD, GAD1 Amino acid metabolism.biosynthesis.glutamate... 0.04 OrthoFinder output from all 47 species
GSVIVT01011565001 GAD, GAD1 Amino acid metabolism.biosynthesis.glutamate... 0.03 OrthoFinder output from all 47 species
Gb_38320 GAD, GAD1 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os03g13300.1 GAD, GAD1, LOC_Os03g13300 glutamate decarboxylase 0.04 OrthoFinder output from all 47 species
LOC_Os04g37460.1 GAD, GAD1, LOC_Os04g37460 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
LOC_Os05g34840.1 GAD, GAD1, LOC_Os05g34840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g20416 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29680 GAD2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_102154g0010 GAD, GAD1 Glutamate decarboxylase 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_65512g0010 GAD3 Glutamate decarboxylase OS=Petunia hybrida... 0.06 OrthoFinder output from all 47 species
Mp3g23860.1 GAD, GAD1 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Nbi_g09361 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06503 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17072 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17193 No alias glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g098240.3.1 GAD, GAD1, Solyc03g098240 glutamate decarboxylase 0.04 OrthoFinder output from all 47 species
Solyc11g011920.2.1 GAD, GAD1, Solyc11g011920 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
Spa_g05104 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 9 190
No external refs found!