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  5. Spa_g54762

Spa_g54762 (EBP1, ATEBP1, ATG2)


Aliases : EBP1, ATEBP1, ATG2

Description : pre-60S ribosomal-subunit proteome export factor *(ARX1) & original description: none


Gene families : OG0003188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g54762

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00167240 EBP1, ATEBP1,... ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.04 OrthoFinder output from all 47 species
AT3G51800 EBP1, ATEBP1, ATG2 metallopeptidase M24 family protein 0.07 OrthoFinder output from all 47 species
Aev_g19911 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Ala_g08839 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.08 OrthoFinder output from all 47 species
Aop_g11352 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.05 OrthoFinder output from all 47 species
Azfi_s0019.g015328 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.08 OrthoFinder output from all 47 species
Cba_g11791 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Ceric.06G082300.1 EBP1, ATEBP1,... pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.19 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000553.33 EBP1, ATEBP1, ATG2 ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.06 OrthoFinder output from all 47 species
Cre13.g604650 EBP1, ATEBP1, ATG2 ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
Dac_g03227 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.07 OrthoFinder output from all 47 species
Ehy_g08408 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.05 OrthoFinder output from all 47 species
Ehy_g09075 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.02 OrthoFinder output from all 47 species
GSVIVT01003934001 EBP1, ATEBP1, ATG2 ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.07 OrthoFinder output from all 47 species
Gb_24072 EBP1, ATEBP1, ATG2 pre-60S ribosomal subunit export factor (ARX1) 0.06 OrthoFinder output from all 47 species
LOC_Os05g28280.1 EBP1, ATEBP1,... pre-60S ribosomal subunit export factor (ARX1) 0.11 OrthoFinder output from all 47 species
Len_g16054 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.05 OrthoFinder output from all 47 species
MA_10426694g0010 EBP1, ATEBP1, ATG2 pre-60S ribosomal subunit export factor (ARX1) 0.08 OrthoFinder output from all 47 species
Mp8g14760.1 EBP1, ATEBP1, ATG2 pre-60S ribosomal subunit export factor (ARX1) 0.07 OrthoFinder output from all 47 species
Msp_g09415 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.04 OrthoFinder output from all 47 species
Nbi_g02808 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.05 OrthoFinder output from all 47 species
Pir_g20368 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014460 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Sam_g19099 No alias pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.1 OrthoFinder output from all 47 species
Solyc06g007200.4.1 EBP1, ATEBP1,... pre-60S ribosomal subunit export factor (ARX1) 0.04 OrthoFinder output from all 47 species
Solyc06g082090.4.1 EBP1, ATEBP1,... pre-60S ribosomal subunit export factor (ARX1) 0.09 OrthoFinder output from all 47 species
Tin_g06544 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.07 OrthoFinder output from all 47 species
Zm00001e027220_P002 EBP1, ATEBP1,... pre-60S ribosomal subunit export factor (ARX1) 0.05 OrthoFinder output from all 47 species
Zm00001e031491_P001 EBP1, ATEBP1,... pre-60S ribosomal subunit export factor (ARX1) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000994 Pept_M24 163 366
No external refs found!