Spa_g53908


Description : not classified & original description: none


Gene families : OG0001159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g53908

Target Alias Description ECC score Gene Family Method Actions
AT2G28420 No alias Lactoylglutathione lyase / glyoxalase I family protein 0.03 OrthoFinder output from all 47 species
Aev_g09453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71508.t1 Aspi01Gene71508 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015508001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_18731 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g45590.1 LOC_Os04g45590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g10562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_15220g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9005842g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_911350g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g03980.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g03369 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc12g006640.2.1 Solyc12g006640 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g30154 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e026712_P002 Zm00001e026712 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 61 181
No external refs found!