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  5. Spa_g52612

Spa_g52612 (ATGRAS2, SCL14, GRAS2)


Aliases : ATGRAS2, SCL14, GRAS2

Description : GRAS-type transcription factor & original description: none


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g52612
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AT1G07530 ATGRAS2, SCL14, GRAS2 SCARECROW-like 14 0.03 OrthoFinder output from all 47 species
AT2G29065 No alias GRAS family transcription factor 0.03 OrthoFinder output from all 47 species
AT3G46600 No alias GRAS family transcription factor 0.05 OrthoFinder output from all 47 species
AT5G59450 No alias GRAS family transcription factor 0.04 OrthoFinder output from all 47 species
Ala_g07652 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27712 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g29168 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32092 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36937 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38338 No alias GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06661 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23035 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29384 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55308 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Als_g60766 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g03496 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12889 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14022 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16795 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21717 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25238 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25508 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30977 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g43069 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g52700 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68234 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68736 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05452.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23275.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24615.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24616.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24617.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24624.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32519.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32538.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32542.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene65531.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69100.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72628.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72630.t1 Aspi01Gene72630 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72636.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0298.g063607 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: CDS=1-2388 0.03 OrthoFinder output from all 47 species
Azfi_s0304.g063850 No alias GRAS-type transcription factor & original description: CDS=1-2073 0.04 OrthoFinder output from all 47 species
Cba_g33193 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60547 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72741 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g06297 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15292 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16966 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18741 No alias GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g22571 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g24468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30355 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33030 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35446 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09269 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g34112 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g09496 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10688 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01639 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03966 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15158 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g31430 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016522001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
GSVIVT01016523001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.07 OrthoFinder output from all 47 species
GSVIVT01024935001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
Gb_29764 No alias transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
LOC_Os03g40080.1 LOC_Os03g40080 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
LOC_Os11g47870.1 LOC_Os11g47870 transcription factor (GRAS) 0.06 OrthoFinder output from all 47 species
LOC_Os11g47890.1 LOC_Os11g47890 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Len_g08381 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g32687 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11143 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08951 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37898 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43903 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06907 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62353 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62859 No alias GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008782 No alias GRAS-type transcription factor & original description: CDS=1-2172 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009546 No alias GRAS-type transcription factor & original description: CDS=1-2640 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020509 No alias GRAS-type transcription factor & original description: CDS=1-1197 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023672 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: CDS=1-1506 0.02 OrthoFinder output from all 47 species
Smo80549 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Solyc01g100200.3.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.08 OrthoFinder output from all 47 species
Solyc04g011630.1.1 Solyc04g011630 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Solyc09g010920.1.1 Solyc09g010920 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Solyc10g086530.1.1 Solyc10g086530 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Spa_g16975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21454 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22407 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020921_P001 Zm00001e020921 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Zm00001e020943_P001 Zm00001e020943 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 485 855
No external refs found!