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  5. Spa_g52195

Spa_g52195 (mMDH1)


Aliases : mMDH1

Description : peroxisomal NAD-dependent malate dehydrogenase & original description: none


Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g52195
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00133930 mMDH1,... Cellular respiration.tricarboxylic acid... 0.02 OrthoFinder output from all 47 species
AT1G53240 mMDH1 Lactate/malate dehydrogenase family protein 0.03 OrthoFinder output from all 47 species
Aev_g29459 mMDH1 mitochondrial NAD-dependent malate dehydrogenase &... 0.04 OrthoFinder output from all 47 species
Ala_g37775 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Aop_g01648 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.14 OrthoFinder output from all 47 species
Aspi01Gene68249.t1 MDH, Aspi01Gene68249 malate dehydrogenase component of AAA-ATPase motor... 0.03 OrthoFinder output from all 47 species
Cba_g15037 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.04 OrthoFinder output from all 47 species
Ceric.16G039200.1 mMDH1, Ceric.16G039200 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
Ceric.28G059400.1 MDH, Ceric.28G059400 malate dehydrogenase component of AAA-ATPase motor... 0.04 OrthoFinder output from all 47 species
Cre03.g194850 MDH Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g46070.1 mMDH1, LOC_Os01g46070 mitochondrial NAD-dependent malate dehydrogenase 0.04 OrthoFinder output from all 47 species
Len_g02228 MDH malate dehydrogenase component of AAA-ATPase motor... 0.02 OrthoFinder output from all 47 species
MA_15580g0010 mMDH1 mitochondrial NAD-dependent malate dehydrogenase 0.03 OrthoFinder output from all 47 species
Nbi_g04197 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.12 OrthoFinder output from all 47 species
Ore_g03139 mMDH2 mitochondrial NAD-dependent malate dehydrogenase &... 0.04 OrthoFinder output from all 47 species
Smo133026 MDH Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo89860 mMDH1 Cellular respiration.tricarboxylic acid... 0.02 OrthoFinder output from all 47 species
Solyc07g062650.4.1 mMDH1, Solyc07g062650 mitochondrial NAD-dependent malate dehydrogenase 0.04 OrthoFinder output from all 47 species
Tin_g00660 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Tin_g03287 MDH malate dehydrogenase component of AAA-ATPase motor... 0.04 OrthoFinder output from all 47 species
Zm00001e020307_P002 mMDH1, Zm00001e020307 mitochondrial NAD-dependent malate dehydrogenase 0.03 OrthoFinder output from all 47 species
Zm00001e026586_P002 mMDH1, Zm00001e026586 Malate dehydrogenase 2, mitochondrial OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e032495_P001 mMDH1, Zm00001e032495 mitochondrial NAD-dependent malate dehydrogenase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022383 Lactate/malate_DH_C 214 336
IPR001236 Lactate/malate_DH_N 70 212
No external refs found!