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  5. Spa_g50719

Spa_g50719


Description : geranylgeranyl reductase *(CHLP) & original description: none


Gene families : OG0004137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50719
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT1G74470 No alias Pyridine nucleotide-disulphide oxidoreductase family protein 0.05 OrthoFinder output from all 47 species
Adi_g056383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056384 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g114339 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g07828 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06864 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.11 OrthoFinder output from all 47 species
Azfi_s0031.g024448 No alias geranylgeranyl reductase *(CHLP) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g01046 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G039000.1 Ceric.02G039000 geranylgeranyl reductase *(CHLP) & original description:... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.20 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Cre01.g050950 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.09 OrthoFinder output from all 47 species
Dac_g01569 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02816 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01007996001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.07 OrthoFinder output from all 47 species
Gb_34162 No alias geranylgeranyl reductase (ChlP) 0.07 OrthoFinder output from all 47 species
LOC_Os02g51080.1 LOC_Os02g51080 geranylgeranyl reductase (ChlP) 0.05 OrthoFinder output from all 47 species
Len_g03280 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.07 OrthoFinder output from all 47 species
Len_g21684 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.1 OrthoFinder output from all 47 species
MA_189742g0010 No alias geranylgeranyl reductase (ChlP) 0.05 OrthoFinder output from all 47 species
Mp4g20130.1 No alias geranylgeranyl reductase (ChlP) 0.2 OrthoFinder output from all 47 species
Msp_g07857 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g05306 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.14 OrthoFinder output from all 47 species
Pir_g16810 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59572 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015786 No alias geranylgeranyl reductase *(CHLP) & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g16455 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.05 OrthoFinder output from all 47 species
Smo271030 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 OrthoFinder output from all 47 species
Solyc03g115980.1.1 Solyc03g115980 geranylgeranyl reductase (ChlP) 0.07 OrthoFinder output from all 47 species
Tin_g04005 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e015812_P003 Zm00001e015812 geranylgeranyl reductase (ChlP) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002938 FAD-bd 72 103
No external refs found!