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  5. Spa_g50619

Spa_g50619 (TUB2)


Aliases : TUB2

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50619

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00190040 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
AT1G75780 TUB1 tubulin beta-1 chain 0.02 OrthoFinder output from all 47 species
AT2G29550 TUB7 tubulin beta-7 chain 0.05 OrthoFinder output from all 47 species
AT5G62690 TUB2 tubulin beta chain 2 0.04 OrthoFinder output from all 47 species
AT5G62700 TUB3 tubulin beta chain 3 0.04 OrthoFinder output from all 47 species
Adi_g048866 TUB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g055550 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Adi_g075879 TUB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100349 TUB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103981 TUB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g105532 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Adi_g105533 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.1 OrthoFinder output from all 47 species
Adi_g107584 TUB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16994 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ala_g23454 TUB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23768 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Ala_g31167 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Als_g10858 TUB8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18460 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Als_g19148 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Als_g33099 TUB6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54930 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Aob_g08895 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aop_g11143 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g20652 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aop_g33014 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Aop_g64603 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aspi01Gene10198.t1 TUB2, Aspi01Gene10198 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35906.t1 TUB2, Aspi01Gene35906 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Azfi_s0077.g037980 TUB2 not classified & original description: CDS=457-1422 0.03 OrthoFinder output from all 47 species
Cba_g06846 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06879 TUB6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15536 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Cba_g15537 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Cba_g69323 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Ceric.03G086000.1 TUB2, Ceric.03G086000 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Ceric.04G002000.1 TUB2, Ceric.04G002000 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.31G054800.1 TUB2, Ceric.31G054800 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001067.6 TUB2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dac_g23831 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dac_g34924 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dac_g42639 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dcu_g05390 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
GSVIVT01024825001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01025777001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01025778001 TUB6 Tubulin beta-4 chain OS=Eleusine indica 0.04 OrthoFinder output from all 47 species
GSVIVT01028941001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01028948001 No alias Tubulin beta-9 chain OS=Gossypium hirsutum 0.02 OrthoFinder output from all 47 species
GSVIVT01037405001 TUB2 Tubulin beta-4 chain OS=Eleusine indica 0.03 OrthoFinder output from all 47 species
Gb_18746 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
LOC_Os01g59150.1 TUB6, LOC_Os01g59150 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Len_g08235 TUB6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08315 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Len_g12596 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Len_g18229 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Len_g29601 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Len_g44835 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Lfl_g05282 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Lfl_g05333 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Lfl_g06502 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
MA_230579g0010 TUB1 Tubulin beta-8 chain OS=Zea mays (sp|q41785|tbb8_maize : 281.0) 0.03 OrthoFinder output from all 47 species
MA_230579g0020 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
MA_9578301g0010 TUB8 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp2g16780.1 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Msp_g08800 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Msp_g39204 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41363 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Msp_g45769 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Nbi_g06645 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Nbi_g06968 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Nbi_g23785 TUB8 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g03054 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pir_g13770 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19218 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Pir_g32238 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pp3c2_26580V3.1 TUB6, Pp3c2_26580 tubulin beta chain 2 0.01 OrthoFinder output from all 47 species
Ppi_g22152 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Ppi_g27529 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ppi_g35826 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ppi_g61758 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ppi_g62362 TUB8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008095 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020465 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022789 TUB6 not classified & original description: CDS=157-1053 0.04 OrthoFinder output from all 47 species
Sam_g09510 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Sam_g09511 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Sam_g19878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25916 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Sam_g40899 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo164404 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Solyc06g005910.4.1 TUB8, Solyc06g005910 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Solyc06g076640.3.1 TUB8, Solyc06g076640 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Solyc10g080940.3.1 TUB6, Solyc10g080940 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Solyc10g085020.3.1 TUB8, Solyc10g085020 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.07 OrthoFinder output from all 47 species
Solyc10g086760.2.1 TUB8, Solyc10g086760 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Spa_g40586 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g48008 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54478 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g05083 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g06951 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g09112 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g19305 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g45513 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Zm00001e000048_P003 TUB2, Zm00001e000048 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.07 OrthoFinder output from all 47 species
Zm00001e025464_P001 TUB6, Zm00001e025464 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 211
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
No external refs found!