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  4. Sequence
  5. Spa_g50298

Spa_g50298


Description : not classified & original description: none


Gene families : OG0002228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50298
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00197p00037090 evm_27.TU.AmTr_v1... LRR receptor-like serine/threonine-protein kinase ERECTA... 0.03 OrthoFinder output from all 47 species
AT1G03440 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT3G17640 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
AT4G03010 No alias RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g057578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g092952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23147 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g33682 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g32426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g41807 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g07271 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g08962 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene14895.t1 Aspi01Gene14895 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39957.t1 Aspi01Gene39957 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39959.t1 Aspi01Gene39959 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0022.g016011 No alias not classified & original description: CDS=1-1395 0.07 OrthoFinder output from all 47 species
Azfi_s0112.g045762 No alias not classified & original description: CDS=1-1434 0.04 OrthoFinder output from all 47 species
Azfi_s0427.g069267 No alias not classified & original description: CDS=1-1407 0.04 OrthoFinder output from all 47 species
Azfi_s0524.g075303 No alias not classified & original description: CDS=1-1419 0.03 OrthoFinder output from all 47 species
Ceric.01G011300.1 Ceric.01G011300 not classified & original description: pacid=50591588... 0.06 OrthoFinder output from all 47 species
Ceric.19G015600.1 Ceric.19G015600 not classified & original description: pacid=50575532... 0.08 OrthoFinder output from all 47 species
Ceric.19G027000.1 Ceric.19G027000 not classified & original description: pacid=50575347... 0.05 OrthoFinder output from all 47 species
Ceric.19G043000.1 Ceric.19G043000 not classified & original description: pacid=50575674... 0.09 OrthoFinder output from all 47 species
Ceric.23G045500.1 Ceric.23G045500 not classified & original description: pacid=50609704... 0.06 OrthoFinder output from all 47 species
Dac_g08481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09254 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g09522 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g01307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011042001 No alias LRR receptor-like serine/threonine-protein kinase ERECTA... 0.03 OrthoFinder output from all 47 species
Gb_19042 No alias LRR receptor-like serine/threonine-protein kinase ERECTA... 0.06 OrthoFinder output from all 47 species
LOC_Os05g33690.3 LOC_Os05g33690 LRR receptor-like serine/threonine-protein kinase ERL1... 0.03 OrthoFinder output from all 47 species
LOC_Os06g28480.1 LOC_Os06g28480 Brassinosteroid LRR receptor kinase BRL2 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os11g42450.1 LOC_Os11g42450 LRR receptor-like serine/threonine-protein kinase ERECTA... 0.06 OrthoFinder output from all 47 species
Len_g01742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g31131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_7346636g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_89273g0010 No alias Leucine-rich repeat receptor-like protein kinase PXL1... 0.04 OrthoFinder output from all 47 species
Msp_g11167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00776 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g07485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0165.g024101 No alias not classified & original description: CDS=786-2282 0.05 OrthoFinder output from all 47 species
Smo444337 No alias Probable LRR receptor-like serine/threonine-protein... 0.04 OrthoFinder output from all 47 species
Solyc06g084420.1.1 Solyc06g084420 LRR receptor-like serine/threonine-protein kinase ERECTA... 0.06 OrthoFinder output from all 47 species
Solyc07g042990.1.1 Solyc07g042990 Receptor protein-tyrosine kinase CEPR1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g39759 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g00772 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e021093_P001 Zm00001e021093 Receptor-like protein kinase HSL1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e032579_P001 Zm00001e032579 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 32 73
IPR001611 Leu-rich_rpt 132 192
No external refs found!