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  5. Spa_g49748

Spa_g49748


Description : regulatory component *(AIPP2) of chromatin silencing regulator complex & original description: none


Gene families : OG0001249 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49748

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00102010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G16680 No alias RING/FYVE/PHD zinc finger superfamily protein 0.09 OrthoFinder output from all 47 species
Aev_g02613 No alias regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Aev_g04196 No alias regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Aev_g25598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11357 No alias regulatory component *(AIPP2) of chromatin silencing... 0.06 OrthoFinder output from all 47 species
Ala_g26817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01217 No alias regulatory component *(AIPP2) of chromatin silencing... 0.04 OrthoFinder output from all 47 species
Aob_g12429 No alias regulatory component *(AIPP2) of chromatin silencing... 0.07 OrthoFinder output from all 47 species
Aob_g41453 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Aop_g33239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24234.t1 Aspi01Gene24234 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0080.g038469 No alias regulatory component *(AIPP2) of chromatin silencing... 0.04 OrthoFinder output from all 47 species
Ceric.09G080200.1 Ceric.09G080200 regulatory component *(AIPP2) of chromatin silencing... 0.04 OrthoFinder output from all 47 species
Dac_g02364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14673 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Dcu_g08331 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Dcu_g17316 No alias regulatory component *(AIPP2) of chromatin silencing... 0.04 OrthoFinder output from all 47 species
Ehy_g02970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024330001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_18601 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_40677 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g42196.1 LOC_Os10g42196 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g06130.1 LOC_Os11g06130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g18770.1 LOC_Os11g18770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g06464.1 LOC_Os12g06464 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g24540.1 LOC_Os12g24540 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g35705 No alias regulatory component *(AIPP2) of chromatin silencing... 0.05 OrthoFinder output from all 47 species
Lfl_g17806 No alias regulatory component *(AIPP2) of chromatin silencing... 0.06 OrthoFinder output from all 47 species
MA_106351g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_62806g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp6g14570.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g25774 No alias regulatory component *(AIPP2) of chromatin silencing... 0.11 OrthoFinder output from all 47 species
Nbi_g05019 No alias regulatory component *(AIPP2) of chromatin silencing... 0.04 OrthoFinder output from all 47 species
Ore_g41526 No alias regulatory component *(AIPP2) of chromatin silencing... 0.05 OrthoFinder output from all 47 species
Pir_g19125 No alias regulatory component *(AIPP2) of chromatin silencing... 0.06 OrthoFinder output from all 47 species
Ppi_g32877 No alias regulatory component *(AIPP2) of chromatin silencing... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020772 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Sam_g36098 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Smo439529 No alias No description available 0.05 OrthoFinder output from all 47 species
Zm00001e029823_P001 Zm00001e029823 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 559 607
No external refs found!