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  5. Spa_g49383

Spa_g49383 (MMP)


Aliases : MMP

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49383

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00141160 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
AT1G70170 MMP matrix metalloproteinase 0.04 OrthoFinder output from all 47 species
GSVIVT01018206001 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
GSVIVT01032544001 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
GSVIVT01032546001 MMP Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
GSVIVT01032549001 MMP Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
LOC_Os06g13180.1 MMP, LOC_Os06g13180 Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
Ppi_g11796 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Smo110370 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
Solyc08g078550.1.1 Solyc08g078550 Matrixin-type metalloprotease 0.02 OrthoFinder output from all 47 species
Zm00001e002324_P001 Zm00001e002324 Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
Zm00001e036059_P001 MMP, Zm00001e036059 Matrixin-type metalloprotease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 179 341
IPR002477 Peptidoglycan-bd-like 73 127
No external refs found!