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  5. Spa_g48279

Spa_g48279


Description : not classified & original description: none


Gene families : OG0002916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48279
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00148370 evm_27.TU.AmTr_v1... Uncharacterized membrane protein At3g27390... 0.05 OrthoFinder output from all 47 species
AT4G37030 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
Aev_g04057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G054600.1 Ceric.35G054600 not classified & original description: pacid=50581624... 0.05 OrthoFinder output from all 47 species
Dcu_g04807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g37670.1 LOC_Os04g37670 Uncharacterized membrane protein At3g27390... 0.04 OrthoFinder output from all 47 species
LOC_Os04g40700.2 LOC_Os04g40700 Uncharacterized membrane protein At3g27390... 0.03 OrthoFinder output from all 47 species
Mp6g14800.1 No alias Uncharacterized membrane protein At3g27390... 0.02 OrthoFinder output from all 47 species
Msp_g07721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021803 No alias not classified & original description: CDS=280-2181 0.03 OrthoFinder output from all 47 species
Zm00001e007966_P001 Zm00001e007966 Uncharacterized membrane protein At3g27390... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!