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  5. Spa_g46281

Spa_g46281


Description : not classified & original description: none


Gene families : OG0001691 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001691_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g46281

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00064430 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g34058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010933 No alias not classified & original description: CDS=59-2233 0.03 OrthoFinder output from all 47 species
Ceric.28G031500.1 Ceric.28G031500 not classified & original description: pacid=50570282... 0.04 OrthoFinder output from all 47 species
Dde_g24431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g29950.3 LOC_Os09g29950 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429264g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ore_g07873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001375 Peptidase_S9 584 793
IPR023302 Pept_S9A_N 40 473
No external refs found!