Zm00001d046318 (GRMZM2G080839)


Aliases : GRMZM2G080839

Description : 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein


Gene families : OG_01_0000072 (Gene family) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d046318
Cluster HCCA cluster: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AT1G26380 No alias FAD-binding Berberine family protein 0.04 Gene family
AT1G26410 No alias FAD-binding Berberine family protein 0.03 Gene family
AT1G26420 No alias FAD-binding Berberine family protein 0.03 Gene family
AT1G30700 No alias FAD-binding Berberine family protein 0.04 Gene family
AT1G30720 No alias FAD-binding Berberine family protein 0.05 Gene family
AT1G30730 No alias FAD-binding Berberine family protein 0.05 Gene family
AT4G20820 No alias FAD-binding Berberine family protein 0.02 Gene family
AT4G20830 No alias FAD-binding Berberine family protein 0.03 Gene family
AT4G20860 No alias FAD-binding Berberine family protein 0.02 Gene family
AT5G44360 No alias FAD-binding Berberine family protein 0.02 Gene family
AT5G44380 No alias FAD-binding Berberine family protein 0.03 Gene family
GSVIVT01020744001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
GSVIVT01020745001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
GSVIVT01020746001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.04 Gene family
GSVIVT01021723001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.06 Gene family
GSVIVT01021734001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
GSVIVT01021739001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.04 Gene family
LOC_Os05g28490 Os05g0353100 No description available 0.03 Gene family
LOC_Os06g35560 Os06g0548200 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
LOC_Os06g35630 Os06g0549300 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
LOC_Os06g35650 Os06g0549600 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.05 Gene family
LOC_Os06g35700 Os06g0549900 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
LOC_Os08g06170 Os08g0158200 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
LOC_Os08g06190 Os08g0158400 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
MA_10144220g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_10428737g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_10428737g0020 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
MA_10430302g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.04 Gene family
MA_10430302g0020 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
MA_132990g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.07 Gene family
MA_162773g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.06 Gene family
MA_26891g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_8516716g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.06 Gene family
MA_8724228g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
Solyc02g022850.1.1 Solyc02g022850.1 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.04 Gene family
Solyc02g079440.2.1 Solyc02g079440.2 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 81 219
IPR012951 BBE 466 525
No external refs found!