Spa_g43315 (MCM7, PRL)

Aliases : MCM7, PRL

Description : not classified & original description: none

Gene families : OG0001056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g43315
Cluster	HCCA: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
Als_g07825	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Azfi_s0544.g076399	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Ceric.04G002100.1	MCM7, PRL,...	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Ceric.10G009500.1	MCM4, Ceric.10G009500	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000144.164	MCM4	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000241.38	MCM7, PRL	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.02	OrthoFinder output from all 47 species
Cre07.g316850	MCM4	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.02	OrthoFinder output from all 47 species
Cre10.g455850	MCM7, PRL	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.03	OrthoFinder output from all 47 species
Dac_g06469	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.04	OrthoFinder output from all 47 species
Dcu_g05722	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
MA_10426237g0010	MCM7, PRL	component MCM7 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species
MA_10434231g0010	MCM4	DNA replication licensing factor MCM4 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Mp3g02380.1	MCM4	component MCM4 of MCM replicative DNA helicase complex	0.02	OrthoFinder output from all 47 species
Mp4g02430.1	MCM9	component MCM9 of MCM8-9 cell cycle auxiliary complex	0.02	OrthoFinder output from all 47 species
Nbi_g04377	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Sam_g27151	No alias	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Solyc01g110130.3.1	MCM4, Solyc01g110130	component MCM4 of MCM replicative DNA helicase complex	0.02	OrthoFinder output from all 47 species
Spa_g10751	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Spa_g11928	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Zm00001e026379_P001	MCM4, Zm00001e026379	component MCM4 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032392	DNA geometric change	None	Extended
BP	GO:0032508	DNA duplex unwinding	IEA	Interproscan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041562	MCM_lid	111	194
IPR001208	MCM_dom	1	92

External Links

No external refs found!

Spa_g43315 (MCM7, PRL)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation