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  5. Spa_g41579

Spa_g41579 (HRE2)


Aliases : HRE2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g41579
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00218200 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF015... 0.04 OrthoFinder output from all 47 species
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G50080 ERF110 ethylene response factor 110 0.03 OrthoFinder output from all 47 species
Adi_g013120 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g057545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060280 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aev_g03105 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Aev_g31370 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09848 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g04727 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10396 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g31880 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g32672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38628 No alias cutin and suberin biosynthesis transcription factor... 0.04 OrthoFinder output from all 47 species
Als_g39098 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g48568 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52359 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g04116 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aob_g26090 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00507 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00047.t1 TINY2, Aspi01Gene00047 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03223.t1 DEAR2, Aspi01Gene03223 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05675.t1 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06525.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08499.t1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene08500.t1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene21088.t1 Aspi01Gene21088 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21110.t1 DEAR2, Aspi01Gene21110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23153.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23161.t1 Aspi01Gene23161 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27034.t1 TINY2, Aspi01Gene27034 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34446.t1 Aspi01Gene34446 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34481.t1 Aspi01Gene34481 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35032.t1 Rap2.6L, Aspi01Gene35032 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52705.t1 DREB26, Aspi01Gene52705 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56618.t1 DEAR2, Aspi01Gene56618 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57065.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene58616.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61391.t1 DEAR3, Aspi01Gene61391 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene66121.t1 Aspi01Gene66121 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0143.g051439 No alias transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Cba_g08443 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Cba_g78270 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.33G045200.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g02023 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g06435 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g15037 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14322 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dcu_g23766 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01348 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Dde_g02774 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dde_g12764 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010629001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01010631001 DREB1B, ATCBF1, CBF1 Dehydration-responsive element-binding protein 1D... 0.03 OrthoFinder output from all 47 species
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01019860001 ddf2 External stimuli response.temperature.ICE-CBF cold... 0.03 OrthoFinder output from all 47 species
GSVIVT01021146001 ERF-1, ATERF-1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01022277001 ABR1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01028316001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01034563001 ERF110 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01035852001 SHN3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_07992 RAP2.9, DEAR5 Ethylene-responsive transcription factor RAP2-9... 0.03 OrthoFinder output from all 47 species
Gb_17501 HRE1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_20395 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_23321 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_24326 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26739 DREB26 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_26855 tny transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26856 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_26857 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_34286 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_36618 DREB26 Ethylene-responsive transcription factor ERF012... 0.04 OrthoFinder output from all 47 species
LOC_Os01g73770.1 CBF4, DREB1D,... transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g45420.1 LOC_Os02g45420 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g54160.2 RAP2.2, LOC_Os02g54160 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46220.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g41030.1 LOC_Os08g41030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g08536 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g13204 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13558 DEAR3 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Len_g33790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04058 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g34009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39388 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40221 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_436575g0010 TINY2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9304g0020 ATERF-9, ERF9, ATERF9 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Mp5g11100.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g03917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30591 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g35440 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g01764 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g12944 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Nbi_g14223 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g26705 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g26878 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30771 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38654 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06183 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pnu_g10709 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15310 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g26646 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pnu_g27039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11128 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012398 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-1134 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016650 ERF38, ATERF38 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021258 CRF5 subgroup ERF-VI transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Solyc01g057080.1.1 Solyc01g057080 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc01g091760.3.1 RAP2.11, Solyc01g091760 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc01g108240.3.1 RRTF1, Solyc01g108240 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g093540.1.1 Solyc03g093540 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g051360.3.1 ABR1, Solyc04g051360 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.02 OrthoFinder output from all 47 species
Solyc08g007840.3.1 Solyc08g007840 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc08g078180.1.1 ERF2, ATERF2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc09g089910.1.1 Solyc09g089910 transcription factor (ERF). transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc09g089930.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g050960.3.1 RRTF1, Solyc10g050960 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g050970.1.1 RRTF1, Solyc10g050970 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc11g042560.1.1 Solyc11g042560 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Spa_g21493 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Spa_g24188 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08822 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g13895 CRF3 subgroup ERF-VI transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g28170 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e000611_P001 HRE1, Zm00001e000611 Ethylene-responsive transcription factor ERF073... 0.03 OrthoFinder output from all 47 species
Zm00001e019026_P001 CRF3, Zm00001e019026 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023157_P001 Zm00001e023157 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 131 180
No external refs found!