1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g41321

Spa_g41321 (NFA03, NFA3, NAP1;3)


Aliases : NFA03, NFA3, NAP1;3

Description : histone chaperone *(NAP) & original description: none


Gene families : OG0000784 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000784_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g41321
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00247340 NFA03, NFA3,... Chromatin organisation.histone chaperone... 0.03 OrthoFinder output from all 47 species
Adi_g078523 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084834 NFA02, NFA2, NAP1;2 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12012 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13852 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014775 ATNAP1;1, NAP1;1 histone chaperone *(NAP) & original description: CDS=127-1098 0.04 OrthoFinder output from all 47 species
Azfi_s0076.g037821 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: CDS=248-1195 0.04 OrthoFinder output from all 47 species
Cba_g23410 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11381 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g07547 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11239 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15776 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06235 No alias histone chaperone *(NAP) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16940 No alias histone chaperone *(NAP) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47534 ATNAP1;1, NAP1;1 histone chaperone *(NAP) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g43616 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032269_P004 NFA02, NFA2,... histone chaperone (NAP) 0.08 OrthoFinder output from all 47 species
Zm00001e036497_P001 NFA02, NFA2,... histone chaperone (NAP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002164 NAP_family 62 306
No external refs found!