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  5. Spa_g29751

Spa_g29751 (HTA6)


Aliases : HTA6

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29751

Target Alias Description ECC score Gene Family Method Actions
AT1G08880 GAMMA-H2AX,... Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G51060 HTA10 histone H2A 10 0.02 OrthoFinder output from all 47 species
AT3G20670 HTA13 histone H2A 13 0.02 OrthoFinder output from all 47 species
AT4G27230 HTA2 histone H2A 2 0.03 OrthoFinder output from all 47 species
AT5G27670 HTA7 histone H2A 7 0.03 OrthoFinder output from all 47 species
AT5G54640 RAT5, HTA1, ATHTA1 Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003557 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005118 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011159 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078410 HTA13 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082134 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17952 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05288 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11673 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44974 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30216 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19828.t1 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41901.t1 RAT5, HTA1,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G033300.1 HTA10, Ceric.01G033300 histone *(H2A) & original description: pacid=50592657... 0.03 OrthoFinder output from all 47 species
Ceric.01G127200.1 HTA6, Ceric.01G127200 histone *(H2A) & original description: pacid=50591993... 0.05 OrthoFinder output from all 47 species
Ceric.06G046500.1 HTA7, Ceric.06G046500 histone *(H2A) & original description: pacid=50619602... 0.03 OrthoFinder output from all 47 species
Ceric.08G041800.1 HTA7, Ceric.08G041800 histone *(H2A) & original description: pacid=50638414... 0.03 OrthoFinder output from all 47 species
Ceric.09G005600.1 HTA6, Ceric.09G005600 histone *(H2A) & original description: pacid=50587119... 0.03 OrthoFinder output from all 47 species
Ceric.16G070100.1 HTA10, Ceric.16G070100 histone *(H2A) & original description: pacid=50590230... 0.03 OrthoFinder output from all 47 species
Ceric.18G042300.1 HTA7, Ceric.18G042300 histone *(H2A) & original description: pacid=50622244... 0.03 OrthoFinder output from all 47 species
Ceric.37G035900.1 HTA6, Ceric.37G035900 histone *(H2A) & original description: pacid=50615631... 0.03 OrthoFinder output from all 47 species
Ceric.37G036400.1 HTA7, Ceric.37G036400 histone *(H2A) & original description: pacid=50615787... 0.03 OrthoFinder output from all 47 species
Cre06.g264750 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g264950 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265350 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g266700 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g268050 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g268300 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g271350 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g273900 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274200 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274800 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g275850 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276500 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276950 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504500 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504750 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g505550 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506250 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre13.g570100 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708550 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709200 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g710400 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g711700 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g713400 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g714500 HTA10 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder output from all 47 species
Dac_g02988 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10226 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29975 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002746001 RAT5, HTA1, ATHTA1 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
GSVIVT01011034001 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder output from all 47 species
GSVIVT01014580001 No alias Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
GSVIVT01025019001 HTA12 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder output from all 47 species
Gb_06384 HTA6 histone (H2A) 0.03 OrthoFinder output from all 47 species
Gb_25326 GAMMA-H2AX,... histone (H2A) 0.03 OrthoFinder output from all 47 species
LOC_Os03g17100.1 HTA12, LOC_Os03g17100 histone (H2A) 0.02 OrthoFinder output from all 47 species
LOC_Os08g33100.1 HTA2, LOC_Os08g33100 histone (H2A) 0.04 OrthoFinder output from all 47 species
LOC_Os12g25120.1 HTA2, LOC_Os12g25120 histone (H2A) 0.03 OrthoFinder output from all 47 species
MA_10425800g0010 HTA7 histone (H2A) 0.03 OrthoFinder output from all 47 species
MA_169054g0020 HTA10 histone (H2A) 0.03 OrthoFinder output from all 47 species
MA_865576g0010 HTA7 histone (H2A) 0.03 OrthoFinder output from all 47 species
MA_94328g0020 GAMMA-H2AX,... histone (H2A) 0.02 OrthoFinder output from all 47 species
Msp_g37655 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c5_1791V3.1 HTA10, Pp3c5_1791 histone H2A 10 0.02 OrthoFinder output from all 47 species
Pp3c5_1800V3.1 HTA10, Pp3c5_1800 histone H2A 10 0.02 OrthoFinder output from all 47 species
Ppi_g04799 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63798 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g099410.3.1 HTA7, Solyc01g099410 histone (H2A) 0.02 OrthoFinder output from all 47 species
Solyc06g084430.4.1 GAMMA-H2AX,... histone (H2A) 0.02 OrthoFinder output from all 47 species
Solyc09g010400.3.1 HTA12, Solyc09g010400 histone (H2A) 0.03 OrthoFinder output from all 47 species
Solyc09g074300.1.1 GAMMA-H2AX,... histone (H2A) 0.05 OrthoFinder output from all 47 species
Solyc10g006560.4.1 HTA10, Solyc10g006560 histone (H2A) 0.03 OrthoFinder output from all 47 species
Solyc11g073250.2.1 HTA12, Solyc11g073250 histone (H2A) 0.05 OrthoFinder output from all 47 species
Solyc11g073260.2.1 HTA12, Solyc11g073260 histone (H2A) 0.04 OrthoFinder output from all 47 species
Solyc12g005270.2.1 HTA10, Solyc12g005270 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e010515_P001 HTA2, Zm00001e010515 histone (H2A) 0.04 OrthoFinder output from all 47 species
Zm00001e012144_P001 GAMMA-H2AX,... histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e035183_P002 RAT5, HTA1,... histone (H2A) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 140 172
IPR007125 Histone_H2A/H2B/H3 58 137
No external refs found!