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  5. Spa_g29177

Spa_g29177 (ATJ3, ATJ)


Aliases : ATJ3, ATJ

Description : co-chaperone *(Hsp40) & original description: none


Gene families : OG0000480 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00054240 ATJ3, ATJ,... DnaJ protein homolog 2 OS=Allium porrum 0.03 OrthoFinder output from all 47 species
Aev_g07834 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31754 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07161 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08868 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24025 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39319 J2, ATJ2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03782 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11180 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08925.t1 ATJ3, ATJ,... co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04864 J2, ATJ2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05119 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35469 J2, ATJ2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G058000.1 ATJ3, ATJ,... co-chaperone *(Hsp40) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g02171 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43251 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02146 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01034612001 J2, ATJ2 DnaJ protein homolog OS=Cucumis sativus 0.03 OrthoFinder output from all 47 species
Gb_35156 ATJ3, ATJ DnaJ protein homolog OS=Cucumis sativus... 0.02 OrthoFinder output from all 47 species
LOC_Os02g43930.1 ATJ3, ATJ, LOC_Os02g43930 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
LOC_Os03g44620.2 ATJ3, ATJ, LOC_Os03g44620 co-chaperone (Hsp40) 0.05 OrthoFinder output from all 47 species
Len_g08613 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18507 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05408 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06550 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g22330 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427399g0010 ATJ3, ATJ co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
MA_10427579g0030 ATJ3, ATJ DnaJ protein homolog OS=Cucumis sativus... 0.04 OrthoFinder output from all 47 species
MA_8811707g0010 ATJ3, ATJ DnaJ protein homolog 2 OS=Allium porrum... 0.02 OrthoFinder output from all 47 species
Msp_g10590 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02901 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13467 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04212 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31580 ATJ3, ATJ not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g090550.3.1 J2, ATJ2, Solyc01g090550 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Solyc04g009770.3.1 ATJ3, ATJ, Solyc04g009770 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Solyc05g055160.3.1 J2, ATJ2, Solyc05g055160 co-chaperone (Hsp40) 0.05 OrthoFinder output from all 47 species
Solyc11g006460.3.1 J2, ATJ2, Solyc11g006460 co-chaperone (Hsp40) 0.04 OrthoFinder output from all 47 species
Tin_g31706 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0042393 histone binding IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002939 DnaJ_C 123 344
IPR001623 DnaJ_domain 14 71
IPR001305 HSP_DnaJ_Cys-rich_dom 149 215
No external refs found!