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  5. Spa_g28262

Spa_g28262


Description : not classified & original description: none


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g28262

Target Alias Description ECC score Gene Family Method Actions
Adi_g086567 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g27193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18715 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Pnu_g10732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023773 FBW2 not classified & original description: CDS=937-2064 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0193.g025375 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Tin_g45831 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 214 234
No external refs found!