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  5. Spa_g26547

Spa_g26547 (OFP4, ATOFP4)


Aliases : OFP4, ATOFP4

Description : transcriptional co-regulator *(OFP) & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26547

Target Alias Description ECC score Gene Family Method Actions
AT5G04820 ATOFP13, OFP13 ovate family protein 13 0.02 OrthoFinder output from all 47 species
Dac_g10583 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00857 No alias transcriptional co-regulator *(OFP) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01018989001 ATOFP7, OFP7 RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
GSVIVT01030204001 ATOFP1, OFP1 RNA biosynthesis.transcriptional activation.OFP... 0.02 OrthoFinder output from all 47 species
GSVIVT01034649001 ATOFP13, OFP13 RNA biosynthesis.transcriptional activation.OFP... 0.02 OrthoFinder output from all 47 species
LOC_Os12g06150.1 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os12g06160.1 LOC_Os12g06160 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Nbi_g42815 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45041 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61770 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019186_P001 Zm00001e019186 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 655 709
IPR025830 DNA_bnd_dom_ovate 1 41
No external refs found!